Q: What are “actual pictures” of atoms actually pictures of?

Something IBM made with some very flat, very clean, very cold copper and a few hundred carbon monoxide molecules.

Something IBM made with some very flat, very clean, very cold copper and a few hundred carbon monoxide molecules.

Physicist: Actual pictures of atoms aren’t actually pictures at all.

There are a few good rules of thumb in physics.  Among the best is: light acts like you’d expect on scales well above its wavelength and acts weird on scales below.  In order to take a picture of a thing you need light to bounce off of it in a reasonable way and travel in straight lines (basically: behave like you’d expect).  But the wavelength of visible light is about half a micrometer (a two-millionth of a meter) and atoms are around one ångström (a ten-billionth of a meter) across.  On the scale of atoms, visible light acts too wonky to be used for photographs.

Atoms are literally too small to see.

An actual photograph of a billiard ball (#3) and what we have in lieu of a photograph of an atom.

(Left) A photograph of a 3 ball.  (Right) What we have in lieu of a photograph of an atom.

You could try using light with a shorter wavelength, but there are issues with that as well.  When light has a wavelength much shorter than an atom is wide, it takes the form of gamma rays and each photon packs enough energy to send atoms flying and/or strip them of their electrons (it is this characteristic that makes gamma rays dangerous).  Using light to image atoms is like trying to get a good look at a bird’s nest by bouncing cannonballs off it.

There are “cheats” that allow us to use light to see the tiny.  When the scales are so small that light behaves more like a wave than a particle, then we just use its wave properties (what else can you do?).  If you get a heck of a lot of identical copies of a thing and arrange them into some kind of repeating structure, then the structure as a whole will have a very particular way of interacting with waves.  Carefully prepared light waves that pass through these regular structures create predictable interference patterns that can be projected onto a screen.  Using this technique we learned a lot about DNA and crystals and all kinds of stuff.  This is the closest thing to a photograph of an atom that is possible using light and, it’s fair to say, it’s not really what anyone means by “photograph”.  It’s less what-the-thing-looks-like and more blurry-rorschach-that-is-useful-to-scientists.  Even worse, it’s not really a picture of actual individual atoms, it’s information about a repeating structure of atoms that happens to take the form of an image.


By passing light (left) or even electron streams (right) through a regular, crystalline structure we create an interference pattern that gives us information about the structure of the crystal (but never pictures of individual atoms).  The picture on the left (left) is a pattern created by DNA (species unimportant).  Notice how not obvious the helical structure is.  The picture on the right is created by an electron beam passing through some simple mineral or salt.

These techniques are still in use today (are relatively cheap), but since 1981 we’ve also had access to the Scanning Tunneling Electron Microscope (STM).  However, despite the images it creates, the STM isn’t taking a photograph either.  The STM sees the world the way a blind person on the end of a tiny robotic arm sees the world.

The essential philosophy behind the Scanning Tunneling Electron Microscope is what allows this dude to know more about the bottom of this chili cauldron than you do.

The STM is basically a needle with a point that is a single atom (literally, it is the pointiest thing possible) which it uses to measure subtle electrical variations (such as a stray atom sitting on what was otherwise a very flat, clean surface).  The “Tunneling Electron” bit of the name refers to the nature of the electrical interaction being used to detect the presence of atoms; when the tip is brought close to an atom electrons will quantum tunnel between them and the exchange of electrons is a detectable as a current.  The “Scanning” bit of the name refers to how this is used to generate a picture: by scanning back and forth across a surface over and over until you’ve bumped every atom with your needle several times.  The pictures so generated aren’t photographs, they’re maps of what the STM’s needle experienced as it was moved over the surface.  The STM “sees” atoms using this needle in the same way you can “see” the bottom of a muddy river with a pokin’ stick.

An STM and some of the pictures it "paints".

An STM and some of the pictures it pokes into being.

This technology has been around for decades and, like the advent of the synth, has given rise to all manner of jackassery.

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14 Responses to Q: What are “actual pictures” of atoms actually pictures of?

  1. Wes says:

    Good job, Physicist!

    Now I know more about how these type “photos” are produced. Shoulda known… YouTube. What a wonderful era to live in!


  2. John Adams says:

    Thank you for that. That was very succinct and fascinating.

  3. Pingback: Q: What are “actual pictures” of atoms actually pictures of? | Ask a Mathematician / Ask a Physicist - Geek Links

  4. Karibe says:

    Thanks for the explanation, very detailed. I like the bird’s nest analogy 🙂

  5. Godparticle says:

    Is there any “picture evidence” for the quantum mechanical orbital concept?

  6. Suki says:

    Thank you for the explanation, I always wanted to know how electron microscopes works 😊

  7. Peter von zur Muehlen says:

    That was very lovely and easy to follow and made a lot of sense, and best of all your crack against synth music is hilarious, as well as the jackassery link.
    Here is completely science fiction type of question. Might there be something that is small enough to bounce off of atoms in a meaningful way, like what about neutrinos, or super tiny sound waves, that could then also be detected by something that translates that into an image. Maybe this makes no sense, but I wonder if you took a big atom and surrounded it with a gas of the smallest atoms. or is there anything smaller than an atom we can gather together in once place? I don’t guess you can just have a jar full of quarks or whatever, right? atoms are like complex eco systems, if you pulled out some of the parts they all die, But anyway, the idea is with a gas of the smallest atoms, if you sent a pulse through them could you maybe make an image of your big atom that way with a sonar like effect, or ultrasound.??????

  8. Robi Rahman says:

    Where did you get the artsy painting of the atom? (The one next to the billiard ball photo.) Can I buy a print somewhere?

  9. Jefferson says:

    Physicist, this text only proves that the existence of atoms actually has never been proven at all, it means that atoms are just pure mathematical hypothesis!
    So this means, nothing in quantum mechanics hypothesis is actually proven.
    So, where does this leave us? Just making hypotheses without a shred of concrete evidence, since all those phenomenons are actually unprovable forever!
    Quantum mechanic and theory of relativity remain unproven forever, ok, the problem with theory of relativity is the fact all those so-called evidences are also 100% falsely misinterpreted.

  10. betaneptune says:

    Peter von zur Muehlen asks about using a probe that is small enough to see atoms. The Physicist actually already answer this:

    “You could try using light with a shorter wavelength, but there are issues with that as well. When light has a wavelength much shorter than an atom is wide, it takes the form of gamma rays and each photon packs enough energy to send atoms flying and/or strip them of their electrons (it is this characteristic that makes gamma rays dangerous). Using light to image atoms is like trying to get a good look at a bird’s nest by bouncing cannonballs off it.”

    But I can elaborate a little to more directly answer your question. To see on the scale of atoms, you need to use something whose wavelength is somewhat smaller. The problem with this is that the smaller the wavelength, the more momentum the probe will have. And when you get small enough, the probe will have enough momentum to mess things up as described above. This principle holds true no matter what the particle. (The Physicist described only photons.)

    This is an unavoidable consequence of quantum mechanics.

  11. betaneptune says:

    “Jefferson” writes, claiming that there is no proof of the existence of atoms. He/she also says that quantum mechanics and relativity will always be unproven. This is simply not true. When you look at all the evidence you will find that they have been proven. All (or at least the vast majority) of the consequences of relativity and of QM have been seen in experiments and observations of the cosmos. Also, most of our modern technology would not work if these theories, and the existence of atoms, weren’t true. They’re certainly right enough for that!

  12. Jefferson says:

    Betaneptune; you are 100% wrong, the fact is that you can never actually observe and therefore prove what is truly going on quantum levels-never, you can only make hypotheses, an indian true story who have never been aware of elephant’s existence 100% proves my arguments, the first blind man thought that elephant’s trunk was a snake, the second blind man thought that elephant’s ear was very rough leaf and the third blind man touched elephant’s leg-blind man thought it was hollow pipe-that’s is my point-in quantum mechanics scientists are equally blind-they do not know what was actually proven in experiments, because they cannot directly observe anything at all, they only have math and somehow all these experiments “prove” that the math is right, but they are merely unprovable hypotheses since the only thing they can do in experiments is to hear sounds and detect energy, but they cannot ever say if any of those hypotheses is true.

    About relativity, yes part of relativity is truly proven but most of the relativity is unproven, actually the evidences are misinterpreted-for example space does not bend, only the trajectories of galaxies, stars and planets bend-but space does not bend at all, what really bends are their trajctories, it’s like you move 2 glasses and you say that spac between them expands of contraacts-which is absolutely 100% wrong because it is misunderstood, because of the fact the space between 2 cosmic objects is static and unchangeable and the only thing that changes and moves are those 2 glasses, also this entire universe is actually electromagnetic and gravitational it is made of all forms and all types of energy-light , so yes even on quantum level this universe is made of energy fields and matter, basically the entire universe is one huge electromagnetic/light field.

    Uses in technology-like I explained and 100% proved above, none can actually prove since both parts of relativity and entire quantum mechanics are totally unprovable, the fact is there have always been and always be uses in technology regardless if an hypothesis is false, in the case of relativity and quantum mechanics is 100% wrong because of the fact we can never perceive the entire reality, the only thing you have is math but it is also 100% wrong since we can barely see/observe a scratch when it comes to objective reality, and than they say they have proven atoms, molecules, subatomic particles, it all works well in models, and models can help a lot in finding cures, therapies for diseases plus uses in technology, but that’s the biggest problem-it’s only use is for finding technologies and not for giving correct explanations on what exactly has been proven in experiments, and in computer and mathematical models, again because of the fact you can only see/observe the tiniest scratch of objective reality, the fact is that all the explanations and interpretations of computer and mathematical models are wrong, since the explanation is correct only for the that part of reality that we can observe, but like in a true indian story that I posted above when blind man touched elephant’s ear he thought that it was a leaf-the same thing is repeated when you cannot observe anything but you simply say that is is molecule, particle or whatever the math shows, but it is wrong the same as blind man is wrong when he says that he touched leaf and actually it was elephant’s ear and that’s because blind people can never actually observe elephant, the same as scientists who are also blind and 100% wrong when it comes to the size of the universe and quantum mechanics say they have observed particles, expansions, molecules atoms, subatomic particles and etc.-they say the same thing as the blind man says when he touched elephant’s ear and thought it was a leaf-the same equally blind scientists claim the same about everything they are doing experiments with.

    What really is proven it is proven mathematically, and nothing more in experiments you can never prove anything, since we can barely scratch the surface of the objective reality when it comes to perception and that’s why everything is 100% wrong when it comes to explanation since scientists can only observe a very, very tiny piece of objective reality, and because of these facts you can never see the entire objective reality, and if you can never see/observe the entire objective reality all the hypotheses that we have are 100% wrong-facts.

  13. Marc Watt says:

    Strong! Now just what the heck they talking about when they claim to have captured image of an electron or photon in near absolute zero conditions?

  14. Rickinator says:

    If these are atoms, what are the atoms on? And why don’t we see the atoms of that thing as well? Similarly, there are images of a pointer-type object used for moving atoms around. Is the pointer object not made of atoms? Thanks.

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